Advanced Diploma in Bioinformatics
MODULE I
Introduction to System Biology
1. Basics of Biology
2. Structure and function of cell
3. Structure and function of Nucleic acid and Protein Biochemistry Approaches
4. Molecular Biology
5. Central Dogma (Transcription and Translation)
6. Molecular Techniques
7. Biotechnology and Genetic Engineering
8. Scopes and Applications
9. Commercial aspects to Patenting and IPR
MODULE II
Introduction to Information Technology
1. Introduction to Operating System
2. MS. Windows and Linux
3. Networking and Internet essential
4. Introduction to Software engineering
5. Softwares in Information Technology
6. C / C++
7. PERIL / BIOPERL
8. Basics of JAVA
MODULE III BOINFORMATICS
Introduction to Bioinformatics
1. Application, History, Scope and trends
2. Biological databases and their Management
Introduction to Bio Databanks
1. Sequence databanks
2. NCBI - GENBANK
3. EBI - EMBL
4. NIG - DDBJ
5. PIR
6. SWISSPROT
7. Structure databank
8. RCSB PDB
Introduction to Databases
1. Sequence Databases
2. Structure databases
3. General databases
4. Microarray, HPRD, ligand, enzyme, microbial, 2D PAGE Bioinformatics methods pro analysis
Introduction to Computational Biology
1. Dynamic Programming Algorithm
2. Computational biology Tools
3. Basics of Genetic algorithm, Neural Network and Artificial intelligences
Biocomputing Sequence and organize retrieval
Similarity search BLAST / FASTA Sequence alignment
1. Pair wise Alignment ALIGN / LALIGN
2. Multiple Sequence Alignment - Clustalw / Multalin
Phylogenetic analysis
1. Introduction
2. Methods
3. Application
Genomics Introduction and Application of
Genomics Genomics Analysis and Tools
1. Gene Identification / Prediction: GENSCAN
2. Genome Comparison: PIPMAKER
3. Gene Network Analysis and Annotation: GENEBOY
4. Genetic material Translation: TRANSQ
Proteomics Introduction and Application of
Proteomics Proteomics Analysis and Tools
1. Protein Identification: PROSITE
2. Motif Analysis: MME
3. Secondary organize prediction: PHD / JPRED
4. Homology modeling: SWISS MODEL / MODELLER
5. Model verification: VERITY 3D / PROCHECK
6. 3D organize visualization: RASMOL I SWISS PDB VIEWER
7. Structure alignment: VAST
8. Structure classification: SCOP
MODULE IV
Chemical Information
1. Introduction, Application, Scope, History and Trends
2. Chemical and Drug Databases
3. Combinatorial Chemistry and its Application
4. High Throughput Screening
5. Chemometrics
Chemical Software
1. Chemical Drawing
2. 3D View
Drug Designing and Discovery Methods
1. Introduction, Application
2. ADME and Drug Designing Methods
3. Molecular Based
4. Docking
5. QSAR
6. Structure Based Designing
Introduction to Clinical-informatics
MODULE V
Bio-industrial Softwares
1. EMBOSS
2. YASARA
3. VECTOR NTI
MODULE VI
Project Introduction to Biological System
1. Basics of Biology
2. Structure and function of cell
3. Structure and function of Nucleic acid and Protein
4. Biochemistry Approaches 5. Molecular biology
6. Central Dogma (Transcription and Translation)
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